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  5. PSME_00025599-RA

PSME_00025599-RA


Description : (at5g63810 : 95.1) member of Glycoside Hydrolase Family 35; beta-galactosidase 10 (BGAL10); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1); Has 2086 Blast hits to 2065 proteins in 466 species: Archae - 15; Bacteria - 851; Metazoa - 358; Fungi - 207; Plants - 597; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p49676|bgal_braol : 89.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Brassica oleracea (Wild cabbage) & (reliability: 190.2) & (original description: no original description)


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025599-RA
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_25153 No alias beta-galactosidase 0.02 Orthogroups_2024-Update
At2g04060 No alias Glycosyl hydrolase family 35 protein... 0.01 Orthogroups_2024-Update
At2g16730 No alias Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9] 0.01 Orthogroups_2024-Update
At3g52840 No alias Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM56] 0.02 Orthogroups_2024-Update
At4g36360 No alias Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9] 0.02 Orthogroups_2024-Update
At5g56870 No alias Beta-galactosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV8] 0.03 Orthogroups_2024-Update
Bradi2g40450 No alias beta-galactosidase 7 0.02 Orthogroups_2024-Update
Bradi2g56597 No alias beta-galactosidase 16 0.08 Orthogroups_2024-Update
Brara.A01608.1 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.B01249.1 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.C01218.1 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.C02409.1 No alias beta-galactosidase *(BGAL8) & EC_3.2 glycosylase 0.01 Orthogroups_2024-Update
Brara.D01993.1 No alias beta-galactosidase *(BGAL9) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.E02743.1 No alias beta-galactosidase *(BGAL1) 0.01 Orthogroups_2024-Update
Brara.G01379.1 No alias beta-galactosidase *(BGAL8) & EC_3.2 glycosylase 0.01 Orthogroups_2024-Update
Brara.K00159.1 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
GRMZM2G081583 No alias beta galactosidase 1 0.01 Orthogroups_2024-Update
Glyma.02G070700 No alias beta-galactosidase 7 0.01 Orthogroups_2024-Update
Glyma.04G247300 No alias beta-galactosidase 16 0.04 Orthogroups_2024-Update
Glyma.06G028700 No alias beta-galactosidase 3 0.03 Orthogroups_2024-Update
Glyma.07G010400 No alias beta galactosidase 1 0.01 Orthogroups_2024-Update
Glyma.07G106500 No alias beta-galactosidase 7 0.03 Orthogroups_2024-Update
Glyma.08G111000 No alias beta galactosidase 9 0.01 Orthogroups_2024-Update
Glyma.08G193500 No alias beta galactosidase 1 0.01 Orthogroups_2024-Update
Glyma.09G062900 No alias beta-galactosidase 12 0.01 Orthogroups_2024-Update
Glyma.13G112300 No alias beta-galactosidase 7 0.02 Orthogroups_2024-Update
Glyma.15G023800 No alias beta galactosidase 1 0.02 Orthogroups_2024-Update
Glyma.15G169500 No alias beta-galactosidase 12 0.01 Orthogroups_2024-Update
Glyma.16G083700 No alias beta-galactosidase 7 0.01 Orthogroups_2024-Update
Glyma.17G047401 No alias beta-galactosidase 15 0.02 Orthogroups_2024-Update
Glyma.17G055100 No alias beta galactosidase 1 0.03 Orthogroups_2024-Update
HORVU3Hr1G081960.9 No alias 1,2-beta-galactosidase & EC_3.2 glycosylase 0.11 Orthogroups_2024-Update
HORVU3Hr1G081980.7 No alias Unknown function 0.01 Orthogroups_2024-Update
LOC_Os01g34920 No alias beta-galactosidase precursor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os02g12730 No alias beta-galactosidase precursor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os03g06940 No alias beta-galactosidase, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g35370 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os10g18400 No alias beta-galactosidase precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g24170 No alias beta-galactosidase precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_72251g0010 No alias (at2g28470 : 966.0) putative beta-galactosidase (BGAL8... 0.03 Orthogroups_2024-Update
MA_87238g0010 No alias (at2g32810 : 705.0) putative beta-galactosidase; beta... 0.02 Orthogroups_2024-Update
PSME_00000669-RA No alias (at2g28470 : 320.0) putative beta-galactosidase (BGAL8... 0.03 Orthogroups_2024-Update
PSME_00008387-RA No alias (at2g28470 : 301.0) putative beta-galactosidase (BGAL8... 0.06 Orthogroups_2024-Update
PSME_00031883-RA No alias (at4g36360 : 124.0) putative beta-galactosidase (BGAL3... 0.01 Orthogroups_2024-Update
PSME_00036669-RA No alias (at4g36360 : 122.0) putative beta-galactosidase (BGAL3... 0.02 Orthogroups_2024-Update
PSME_00046199-RA No alias (p45582|bgal_aspof : 107.0) Beta-galactosidase precursor... 0.05 Orthogroups_2024-Update
Potri.001G025800 No alias beta-galactosidase 7 0.01 Orthogroups_2024-Update
Potri.004G036000 No alias beta-galactosidase 3 0.02 Orthogroups_2024-Update
Potri.004G174800 No alias glycosyl hydrolase family 35 protein 0.01 Orthogroups_2024-Update
Potri.005G180600 No alias beta-galactosidase 16 0.02 Orthogroups_2024-Update
Potri.006G139100 No alias beta-galactosidase 7 0.04 Orthogroups_2024-Update
Potri.006G144500 No alias beta galactosidase 1 0.01 Orthogroups_2024-Update
Potri.009G012400 No alias beta-galactosidase 8 0.03 Orthogroups_2024-Update
Pp1s10_144V6 No alias beta-galactosidase 0.01 Orthogroups_2024-Update
Seita.5G189300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G399300.1 No alias 1,2-beta-galactosidase & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Seita.6G239900.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc12g008840 No alias beta-galactosidase 4 0.02 Orthogroups_2024-Update
Sopen03g040350 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update
Sopen06g022060 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update
Sopen07g018350 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!