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  5. PSME_00025803-RA

PSME_00025803-RA


Description : (at1g04780 : 671.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G24210.1); Has 1138 Blast hits to 827 proteins in 107 species: Archae - 2; Bacteria - 12; Metazoa - 639; Fungi - 18; Plants - 352; Viruses - 2; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 1342.0) & (original description: no original description)


Gene families : OG_42_0000816 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000816_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025803-RA
Cluster HCCA clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
A4A49_10126 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At3g04470 No alias Ankyrin repeat family protein... 0.05 Orthogroups_2024-Update
Brara.K01252.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.10G165700 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Glyma.19G248000 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Pp1s36_275V6 No alias F13M7.23; ankyrin repeat family protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR021832 ANKRD13 186 670
No external refs found!