Description : (at2g21620 : 113.0) Encodes gene that is induced in response to dessication; mRNA expression is seen 10 and 24 hrs after start of dessication treatment.; RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 1098 Blast hits to 1097 proteins in 198 species: Archae - 70; Bacteria - 241; Metazoa - 121; Fungi - 60; Plants - 588; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description)
Gene families : OG_42_0002002 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002002_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00025871-RA | |
Cluster | HCCA clusters: Cluster_138 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PSME_00007563-RA | No alias | (at2g21620 : 81.6) Encodes gene that is induced in... | 0.04 | Orthogroups_2024-Update | |
PSME_00016152-RA | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
PSME_00043971-RA | No alias | (at2g21620 : 86.3) Encodes gene that is induced in... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Predicted GO |
CC | GO:0000786 | nucleosome | IEP | Predicted GO |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | Predicted GO |
MF | GO:0004650 | polygalacturonase activity | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Predicted GO |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
MF | GO:0019900 | kinase binding | IEP | Predicted GO |
MF | GO:0019901 | protein kinase binding | IEP | Predicted GO |
BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
BP | GO:0042325 | regulation of phosphorylation | IEP | Predicted GO |
BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
BP | GO:0043549 | regulation of kinase activity | IEP | Predicted GO |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
BP | GO:0045859 | regulation of protein kinase activity | IEP | Predicted GO |
BP | GO:0051338 | regulation of transferase activity | IEP | Predicted GO |
BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Predicted GO |
BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Predicted GO |
No external refs found! |