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  5. PSME_00025875-RA

PSME_00025875-RA


Description : (at1g19715 : 86.3) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (reliability: 160.2) & (original description: no original description)


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025875-RA
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
PSME_00002592-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00021404-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00030331-RA No alias (at1g19715 : 88.2) Mannose-binding lectin superfamily... 0.06 Orthogroups_2024-Update
PSME_00031600-RA No alias (at1g19715 : 97.8) Mannose-binding lectin superfamily... 0.04 Orthogroups_2024-Update
PSME_00031601-RA No alias (at1g52100 : 101.0) Mannose-binding lectin superfamily... 0.03 Orthogroups_2024-Update
Seita.7G012100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G344800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G168800.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 53 189
No external refs found!