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  5. PSME_00025902-RA

PSME_00025902-RA


Description : (at3g63010 : 179.0) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.; GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink). & (q6l545|gid1_orysa : 169.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 358.0) & (original description: no original description)


Gene families : OG_42_0000013 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00025902-RA

Target Alias Description ECC score Gene Family Method Actions
138855 No alias carboxyesterase 20 0.02 Orthogroups_2024-Update
89683 No alias carboxyesterase 18 0.03 Orthogroups_2024-Update
A4A49_41468 No alias 2-hydroxyisoflavanone dehydratase 0.04 Orthogroups_2024-Update
At1g47480 No alias Probable carboxylesterase 2... 0.02 Orthogroups_2024-Update
At5g23530 No alias Probable carboxylesterase 18... 0.02 Orthogroups_2024-Update
At5g62180 No alias Probable carboxylesterase 120... 0.04 Orthogroups_2024-Update
Bradi3g38040 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g32080 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g32310 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Brara.A02302.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G406014 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G239400 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G208300 No alias carboxyesterase 18 0.03 Orthogroups_2024-Update
HORVU5Hr1G017510.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G068140.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G068800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g11090 No alias CXE carboxylesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g20200 No alias gibberellin receptor GID1L2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g37010 No alias gibberellin receptor GID1L2, putative, expressed 0.02 Orthogroups_2024-Update
MA_93044g0010 No alias (at5g23530 : 197.0) carboxyesterase 18 (CXE18); CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00009933-RA No alias (at3g63010 : 169.0) Encodes a gibberellin (GA) receptor... 0.01 Orthogroups_2024-Update
Potri.008G118400 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Seita.4G079200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G079300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G109700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G083000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G083100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G435000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G098400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G041701.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G156600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g005230 No alias Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g040890 No alias Gibberellin receptor GID1, putative (AHRD V3.3 *** G7IC52_MEDTR) 0.02 Orthogroups_2024-Update
Solyc09g075700 No alias Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen09g030480 No alias alpha/beta hydrolase fold 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 220 386
No external refs found!