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  5. PSME_00026015-RA

PSME_00026015-RA


Description : (at5g08380 : 408.0) alpha-galactosidase 1 (AGAL1); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has 1677 Blast hits to 1666 proteins in 372 species: Archae - 6; Bacteria - 673; Metazoa - 331; Fungi - 272; Plants - 227; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (q9fxt4|agal_orysa : 398.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (reliability: 816.0) & (original description: no original description)


Gene families : OG_42_0000657 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000657_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00026015-RA

Target Alias Description ECC score Gene Family Method Actions
Bradi3g29797 No alias alpha-galactosidase 1 0.03 Orthogroups_2024-Update
GRMZM2G112129 No alias alpha-galactosidase 2 0.02 Orthogroups_2024-Update
GRMZM2G452669 No alias Melibiase family protein 0.03 Orthogroups_2024-Update
PSME_00004871-RA No alias (at5g08380 : 481.0) alpha-galactosidase 1 (AGAL1);... 0.07 Orthogroups_2024-Update
PSME_00014093-RA No alias (at5g08370 : 516.0) alpha-galactosidase 2 (AGAL2);... 0.04 Orthogroups_2024-Update
Pp1s19_295V6 No alias alpha-galactosidase-like protein 0.04 Orthogroups_2024-Update
Seita.2G164200.1 No alias alpha-galactosidase *(AGAL) & EC_3.2 glycosylase 0.06 Orthogroups_2024-Update
Sopen03g029830 No alias Melibiase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002241 Glyco_hydro_27 48 302
No external refs found!