1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00026044-RA

PSME_00026044-RA


Description : (at1g14190 : 450.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G14185.1); Has 12034 Blast hits to 11141 proteins in 1120 species: Archae - 6; Bacteria - 4075; Metazoa - 1036; Fungi - 1877; Plants - 336; Viruses - 6; Other Eukaryotes - 4698 (source: NCBI BLink). & (reliability: 900.0) & (original description: no original description)


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00026044-RA
Cluster HCCA clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
413925 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
A4A49_18141 No alias protein hothead 0.03 Orthogroups_2024-Update
Brara.B02049.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10041123g0010 No alias (at1g73050 : 159.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
MA_10433135g0010 No alias (at1g12570 : 252.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
MA_11792g0020 No alias (at5g51950 : 284.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00041186-RA No alias (at1g12570 : 451.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
Potri.010G168200 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 60 343
IPR007867 GMC_OxRtase_C 425 561
No external refs found!