- Home
- Species
- Pseudotsuga menziesii
- Sequence
- PSME_00026116-RA
PSME_00026116-RA
Description : (at5g08530 : 848.0) 51 kDa subunit of complex I (CI51); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (InterPro:IPR001949), NADH:ubiquinone oxidoreductase, 51kDa subunit (InterPro:IPR011538), NADH ubiquinone oxidoreductase, F subunit (InterPro:IPR011537), Soluble ligand binding domain (InterPro:IPR019554), NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding (InterPro:IPR019575); Has 8894 Blast hits to 8884 proteins in 1703 species: Archae - 49; Bacteria - 4484; Metazoa - 213; Fungi - 125; Plants - 97; Viruses - 0; Other Eukaryotes - 3926 (source: NCBI BLink). & (reliability: 1696.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00026116-RA | |
| Cluster | HCCA clusters: Cluster_96 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| Bradi1g53800 | No alias | 51 kDa subunit of complex I | 0.03 | Orthogroups_2024-Update | |
| Pp1s13_116V6 | No alias | esterase lipase thioesterase | 0.02 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0048037 | cofactor binding | None | Extended |
| MF | GO:0051536 | iron-sulfur cluster binding | None | Extended |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEA | InterProScan predictions |
| MF | GO:0051540 | metal cluster binding | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0006457 | protein folding | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
| MF | GO:0042802 | identical protein binding | IEP | Predicted GO |
| MF | GO:0042803 | protein homodimerization activity | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
| MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
| BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR019554 | Soluble_ligand-bd | 296 | 345 |
| IPR019575 | Nuop51_4Fe4S-bd | 386 | 468 |
| IPR011538 | Nuo51_FMN-bd | 100 | 269 |
