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  5. PSME_00026168-RA

PSME_00026168-RA


Description : (at2g20230 : 140.0) Tetraspanin family protein; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT4G28770.2); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)


Gene families : OG_42_0002568 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002568_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00026168-RA

Target Alias Description ECC score Gene Family Method Actions
At2g20740 No alias Tetraspanin-19 [Source:UniProtKB/Swiss-Prot;Acc:Q940P5] 0.02 Orthogroups_2024-Update
GRMZM2G007206 No alias Tetraspanin family protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007863 Peptidase_M16_C 207 290
No external refs found!