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  5. PSME_00026188-RA

PSME_00026188-RA


Description : (at4g37080 : 202.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G42690.2). & (reliability: 404.0) & (original description: no original description)


Gene families : OG_42_0000727 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00026188-RA
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
PSME_00006146-RA No alias (at5g42690 : 117.0) Protein of unknown function, DUF547;... 0.01 Orthogroups_2024-Update
PSME_00012980-RA No alias (at4g37080 : 234.0) Protein of unknown function, DUF547;... 0.05 Orthogroups_2024-Update
PSME_00027940-RA No alias (at4g37080 : 127.0) Protein of unknown function, DUF547;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 58 128
IPR006869 DUF547 468 570
No external refs found!