Description : (at5g23850 : 461.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G48980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 922.0) & (original description: no original description)
Gene families : OG_42_0000511 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000511_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00026560-RA | |
Cluster | HCCA clusters: Cluster_185 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre02.g117650 | No alias | Arabidopsis thaliana protein of unknown function (DUF821) | 0.02 | Orthogroups_2024-Update | |
Cre12.g531750 | No alias | Arabidopsis thaliana protein of unknown function (DUF821) | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000347 | THO complex | IEP | Predicted GO |
CC | GO:0000445 | THO complex part of transcription export complex | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0007049 | cell cycle | IEP | Predicted GO |
MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016298 | lipase activity | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
MF | GO:0016854 | racemase and epimerase activity | IEP | Predicted GO |
MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
MF | GO:0050290 | sphingomyelin phosphodiesterase D activity | IEP | Predicted GO |
BP | GO:0051321 | meiotic cell cycle | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006598 | LipoPS_modifying | 94 | 487 |
No external refs found! |