1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00026572-RA

PSME_00026572-RA


Description : (at3g10260 : 161.0) Reticulon family protein; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 1060 Blast hits to 1060 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 0; Plants - 458; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00026572-RA
Cluster HCCA clusters: Cluster_638

Target Alias Description ECC score Gene Family Method Actions
At2g15280 No alias Reticulon-like protein B10... 0.04 Orthogroups_2024-Update
Brara.C03742.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
GRMZM2G152921 No alias Reticulon family protein 0.02 Orthogroups_2024-Update
Glyma.08G304100 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
LOC_Os03g21840 No alias reticulon domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00023278-RA No alias (at3g54120 : 149.0) Reticulon family protein; FUNCTIONS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 44 179
No external refs found!