1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen05g034550

Sopen05g034550


Description : von Willebrand factor type A domain


Gene families : OG_42_0000384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g034550
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Bradi3g28190 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.02G218200 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Glyma.08G273400 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.14G185600 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G038870.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g42980 No alias zinc finger family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g10250 No alias zinc finger family protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00049451-RA No alias (at5g60710 : 186.0) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
Potri.001G082150 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 Orthogroups_2024-Update
Potri.008G038450 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 Orthogroups_2024-Update
Seita.7G278500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G230200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G226900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 81 110
IPR032838 Vwaint_dom 629 701
IPR002035 VWF_A 278 462
No external refs found!