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Description : (at3g09040 : 607.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 73401 Blast hits to 14698 proteins in 289 species: Archae - 0; Bacteria - 19; Metazoa - 251; Fungi - 280; Plants - 71776; Viruses - 0; Other Eukaryotes - 1075 (source: NCBI BLink). & (q76c99|rf1_orysa : 120.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1214.0) & (original description: no original description)
Gene families : OG_42_0125784 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00026882-RA | |
| Cluster | HCCA clusters: Cluster_47 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
| BP | GO:0006479 | protein methylation | IEP | Predicted GO |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| BP | GO:0016571 | histone methylation | IEP | Predicted GO |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
| BP | GO:0032259 | methylation | IEP | Predicted GO |
| BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 673 | 718 |
| IPR002885 | Pentatricopeptide_repeat | 772 | 819 |
| IPR002885 | Pentatricopeptide_repeat | 165 | 213 |
| IPR002885 | Pentatricopeptide_repeat | 873 | 920 |
| IPR002885 | Pentatricopeptide_repeat | 471 | 500 |
| IPR002885 | Pentatricopeptide_repeat | 240 | 267 |
| IPR002885 | Pentatricopeptide_repeat | 572 | 596 |
| IPR002885 | Pentatricopeptide_repeat | 847 | 872 |
| IPR002885 | Pentatricopeptide_repeat | 268 | 298 |
| IPR002885 | Pentatricopeptide_repeat | 371 | 400 |
| IPR002885 | Pentatricopeptide_repeat | 544 | 567 |
| IPR002885 | Pentatricopeptide_repeat | 645 | 670 |
| IPR002885 | Pentatricopeptide_repeat | 746 | 771 |
| No external refs found! |