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  5. PSME_00026939-RA

PSME_00026939-RA


Description : (at1g27620 : 115.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid, pollen tube; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G40230.1); Has 2626 Blast hits to 2616 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 66; Plants - 2554; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)


Gene families : OG_42_0009531 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009531_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00026939-RA
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
PSME_00019278-RA No alias (at1g27620 : 95.1) HXXXD-type acyl-transferase family... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003480 Transferase 6 217
No external refs found!