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  5. PSME_00026952-RA

PSME_00026952-RA


Description : (at3g03790 : 201.0) ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1). & (reliability: 402.0) & (original description: no original description)


Gene families : OG_42_0001275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001275_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00026952-RA
Cluster HCCA clusters: Cluster_678

Target Alias Description ECC score Gene Family Method Actions
418831 No alias Function unknown 0.04 Orthogroups_2024-Update
PSME_00010089-RA No alias (at5g23570 : 423.0) Required for posttranscriptional... 0.03 Orthogroups_2024-Update
Potri.003G188200 No alias XS domain-containing protein / XS zinc finger... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 392 435
IPR000408 Reg_chr_condens 296 341
No external refs found!