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  5. PSME_00026972-RA

PSME_00026972-RA


Description : (at1g06550 : 165.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: response to karrikin, fatty acid beta-oxidation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 26566 Blast hits to 26556 proteins in 2155 species: Archae - 406; Bacteria - 18031; Metazoa - 1157; Fungi - 686; Plants - 463; Viruses - 0; Other Eukaryotes - 5823 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description)


Gene families : OG_42_0000582 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000582_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00026972-RA
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
A4A49_02905 No alias putative 3-hydroxyisobutyryl-coa hydrolase 3 0.01 Orthogroups_2024-Update
A4A49_07897 No alias 3-hydroxyisobutyryl-coa hydrolase-like protein 1, mitochondrial 0.07 Orthogroups_2024-Update
Brara.D01753.1 No alias 3-hydroxyisobutyryl-CoA hydrolase *(CHY) & EC_3.1... 0.02 Orthogroups_2024-Update
Brara.D01759.1 No alias 3-hydroxyisobutyryl-CoA hydrolase *(CHY) & EC_3.1... 0.02 Orthogroups_2024-Update
Brara.H01331.1 No alias component *(mS47) of small mitoribosomal-subunit... 0.01 Orthogroups_2024-Update
Glyma.14G102600 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.02 Orthogroups_2024-Update
LOC_Os01g54860 No alias enoyl-CoA hydratase/isomerase family protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.8G174100.1 No alias 3-hydroxyisobutyryl-CoA hydrolase *(CHY) & EC_3.1... 0.01 Orthogroups_2024-Update
Seita.8G175000.1 No alias 3-hydroxyisobutyryl-CoA hydrolase *(CHY) & EC_3.1... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
InterPro domains Description Start Stop
IPR032259 HIBYL-CoA-H 28 143
No external refs found!