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  5. PSME_00027057-RA

PSME_00027057-RA


Description : (at2g26560 : 338.0) Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus.; phospholipase A 2A (PLA2A); FUNCTIONS IN: lipase activity, nutrient reservoir activity; INVOLVED IN: in 6 processes; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2114 Blast hits to 2104 proteins in 375 species: Archae - 0; Bacteria - 479; Metazoa - 231; Fungi - 198; Plants - 897; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (p15478|pat5_soltu : 231.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 676.0) & (original description: no original description)


Gene families : OG_42_0000167 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027057-RA
Cluster HCCA clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
81931 No alias phospholipase A 2A 0.02 Orthogroups_2024-Update
A4A49_03126 No alias patatin-like protein 3 0.03 Orthogroups_2024-Update
At5g43590 No alias Acyl transferase/acyl hydrolase/lysophospholipase... 0.03 Orthogroups_2024-Update
Brara.C02495.1 No alias phospholipase-A2 *(pPLA2-II)) 0.02 Orthogroups_2024-Update
Glyma.06G037900 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
Glyma.07G115400 No alias Acyl transferase/acyl hydrolase/lysophospholipase... 0.04 Orthogroups_2024-Update
HORVU4Hr1G075070.7 No alias phospholipase-A2 *(pPLA2-II)) 0.02 Orthogroups_2024-Update
HORVU7Hr1G036460.1 No alias phospholipase-A2 *(pPLA2-II)) 0.02 Orthogroups_2024-Update
MA_10437194g0020 No alias (at4g37060 : 347.0) Patatin-related phospholipase A.... 0.04 Orthogroups_2024-Update
MA_47191g0010 No alias (at4g37060 : 325.0) Patatin-related phospholipase A.... 0.03 Orthogroups_2024-Update
Mp5g21740.1 No alias phospholipase A2 (pPLA2-II) 0.03 Orthogroups_2024-Update
PSME_00032492-RA No alias (at2g26560 : 257.0) Encodes a lipid acyl hydrolase with... 0.04 Orthogroups_2024-Update
Potri.019G015300 No alias phospholipase A 2A 0.02 Orthogroups_2024-Update
Pp1s141_142V6 No alias patatin t5 0.02 Orthogroups_2024-Update
Seita.6G183800.1 No alias phospholipase-A2 *(pPLA2-II)) 0.04 Orthogroups_2024-Update
Sobic.007G158500.1 No alias phospholipase-A2 *(pPLA2-II)) 0.02 Orthogroups_2024-Update
Solyc04g079250 No alias Patatin (AHRD V3.3 *** K4BV09_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 18 226
No external refs found!