Sopen05g034740

Description : Cleft lip and palate transmembrane protein 1 (CLPTM1)

Gene families : OG_42_0005451 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005451_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g034740
Cluster	HCCA clusters: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10950	No alias	hypothetical protein	0.05	Orthogroups_2024-Update
At5g08500	No alias	Cleft lip and palate associated transmembrane...	0.02	Orthogroups_2024-Update
Kfl00454_0040	kfl00454_0040_v1.1	(at5g08500 : 608.0) Transmembrane CLPTM1 family protein;...	0.02	Orthogroups_2024-Update
Potri.004G134500	No alias	Transmembrane CLPTM1 family protein	0.06	Orthogroups_2024-Update
Sobic.006G089400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Solyc05g056350	No alias	Cleft lip and palate transmembrane protein, putative...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008429	CLPTM1	32	465

External Links

No external refs found!