Description : (at3g26744 : 85.1) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description)
Gene families : OG_42_0001007 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001007_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00027164-RA | |
Cluster | HCCA clusters: Cluster_41 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os01g70310 | No alias | inducer of CBF expression 2, putative, expressed | 0.02 | Orthogroups_2024-Update | |
PSME_00036646-RA | No alias | (at1g12860 : 231.0) Encodes ICE2 (Inducer of CBF... | 0.03 | Orthogroups_2024-Update | |
PSME_00049315-RA | No alias | (at1g12860 : 215.0) Encodes ICE2 (Inducer of CBF... | 0.06 | Orthogroups_2024-Update | |
PSME_00054211-RA | No alias | (at3g26744 : 119.0) Encodes a MYC-like bHLH... | 0.02 | Orthogroups_2024-Update | |
Pp1s194_138V6 | No alias | transcription factor | 0.02 | Orthogroups_2024-Update | |
Pp1s218_24V6 | No alias | Transcription factor ICE1 (Inducer of CBF expression 1)... | 0.02 | Orthogroups_2024-Update | |
Pp1s33_223V6 | No alias | transcription factor ice1-like | 0.02 | Orthogroups_2024-Update | |
Seita.5G438300.1 | No alias | transcription factor *(ICE1/2) & bHLH-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Sopen03g037210 | No alias | Helix-loop-helix DNA-binding domain | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046983 | protein dimerization activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003774 | motor activity | IEP | Predicted GO |
MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0030151 | molybdenum ion binding | IEP | Predicted GO |
BP | GO:0042126 | nitrate metabolic process | IEP | Predicted GO |
BP | GO:0042128 | nitrate assimilation | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Predicted GO |
BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:2001057 | reactive nitrogen species metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011598 | bHLH_dom | 191 | 230 |
No external refs found! |