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  5. PSME_00027243-RA

PSME_00027243-RA


Description : (p30222|hs22c_pethy : 206.0) Small heat shock protein, chloroplast precursor - Petunia hybrida (Petunia) & (at4g27670 : 203.0) chloroplast located small heat shock protein.; heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (reliability: 406.0) & (original description: no original description)


Gene families : OG_42_0001692 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027243-RA
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G080724 No alias heat shock protein 21 0.01 Orthogroups_2024-Update
Glyma.08G212000 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G246600 No alias heat shock protein 21 0.03 Orthogroups_2024-Update
LOC_Os05g23140 No alias retrotransposon protein, putative, LINE subclass, expressed 0.02 Orthogroups_2024-Update
MA_10434235g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_5838g0010 No alias (p46254|hs22m_pea : 117.0) Heat shock 22 kDa protein,... 0.03 Orthogroups_2024-Update
MA_605776g0010 No alias (at4g27670 : 134.0) chloroplast located small heat shock... 0.02 Orthogroups_2024-Update
Potri.010G053400 No alias heat shock protein 21 0.04 Orthogroups_2024-Update
Sobic.007G217300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 140 238
No external refs found!