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    4. Sequence
    5. PSME_00027255-RA

    PSME_00027255-RA


    Description : (at2g24130 : 488.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (p93194|rpk1_iponi : 292.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 976.0) & (original description: no original description)


    Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

    Sequence : coding (download), protein (download)


    Attention: This gene has low abundance.


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    Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


    Type Description Actions
    Neighborhood Pseudotsuga release: PSME_00027255-RA
    Cluster HCCA clusters: Cluster_30

    Target Alias Description ECC score Gene Family Method Actions
    A4A49_26079 No alias putative lrr receptor-like serinethreonine-protein kinase 0.03 Orthogroups_2024-Update
    Bradi1g72572 No alias Leucine-rich receptor-like protein kinase family protein 0.01 Orthogroups_2024-Update
    Brara.B02886.1 No alias LRR-XII protein kinase & flagellin receptor kinase... 0.02 Orthogroups_2024-Update
    Glyma.02G206300 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
    HORVU6Hr1G038550.2 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
    LOC_Os02g39660 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
    MA_10431203g0010 No alias (at2g24130 : 284.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
    MA_166390g0010 No alias (at1g63430 : 96.3) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
    MA_93312g0010 No alias (at3g47570 : 161.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
    PSME_00006646-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
    PSME_00008690-RA No alias (at3g47570 : 218.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
    PSME_00014024-RA No alias (at2g24130 : 458.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
    PSME_00030106-RA No alias (at3g47110 : 609.0) Leucine-rich repeat protein kinase... 0.01 Orthogroups_2024-Update
    PSME_00031091-RA No alias (at5g46330 : 205.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
    PSME_00035635-RA No alias (at3g47110 : 648.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
    PSME_00038472-RA No alias (at5g46330 : 359.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
    PSME_00042436-RA No alias (at5g46330 : 119.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
    PSME_00055533-RA No alias (at3g47110 : 628.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
    Seita.6G130400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
    Sobic.003G265900.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
    Sobic.005G187700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0000166 nucleotide binding IEP Predicted GO
    MF GO:0003690 double-stranded DNA binding IEP Predicted GO
    MF GO:0003735 structural constituent of ribosome IEP Predicted GO
    MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
    MF GO:0004672 protein kinase activity IEP Predicted GO
    MF GO:0005198 structural molecule activity IEP Predicted GO
    MF GO:0005488 binding IEP Predicted GO
    MF GO:0005515 protein binding IEP Predicted GO
    MF GO:0005524 ATP binding IEP Predicted GO
    CC GO:0005622 intracellular IEP Predicted GO
    CC GO:0005777 peroxisome IEP Predicted GO
    CC GO:0005840 ribosome IEP Predicted GO
    BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
    BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
    BP GO:0006412 translation IEP Predicted GO
    BP GO:0006464 cellular protein modification process IEP Predicted GO
    BP GO:0006468 protein phosphorylation IEP Predicted GO
    BP GO:0006473 protein acetylation IEP Predicted GO
    BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
    BP GO:0006518 peptide metabolic process IEP Predicted GO
    BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
    BP GO:0006793 phosphorus metabolic process IEP Predicted GO
    BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
    BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
    BP GO:0006873 cellular ion homeostasis IEP Predicted GO
    BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
    BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
    BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
    BP GO:0006914 autophagy IEP Predicted GO
    MF GO:0008144 drug binding IEP Predicted GO
    BP GO:0008150 biological_process IEP Predicted GO
    BP GO:0008152 metabolic process IEP Predicted GO
    MF GO:0008199 ferric iron binding IEP Predicted GO
    BP GO:0009062 fatty acid catabolic process IEP Predicted GO
    BP GO:0009987 cellular process IEP Predicted GO
    MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
    MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
    BP GO:0016042 lipid catabolic process IEP Predicted GO
    BP GO:0016054 organic acid catabolic process IEP Predicted GO
    MF GO:0016301 kinase activity IEP Predicted GO
    BP GO:0016310 phosphorylation IEP Predicted GO
    BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
    MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
    MF GO:0016740 transferase activity IEP Predicted GO
    MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
    MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
    MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
    MF GO:0017076 purine nucleotide binding IEP Predicted GO
    BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
    BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
    BP GO:0019395 fatty acid oxidation IEP Predicted GO
    BP GO:0019538 protein metabolic process IEP Predicted GO
    BP GO:0019725 cellular homeostasis IEP Predicted GO
    BP GO:0030003 cellular cation homeostasis IEP Predicted GO
    BP GO:0030258 lipid modification IEP Predicted GO
    MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
    CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
    BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
    CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
    CC GO:0031417 NatC complex IEP Predicted GO
    MF GO:0032553 ribonucleotide binding IEP Predicted GO
    MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
    MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
    BP GO:0034440 lipid oxidation IEP Predicted GO
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
    MF GO:0036094 small molecule binding IEP Predicted GO
    BP GO:0036211 protein modification process IEP Predicted GO
    CC GO:0042579 microbody IEP Predicted GO
    BP GO:0042592 homeostatic process IEP Predicted GO
    BP GO:0043043 peptide biosynthetic process IEP Predicted GO
    MF GO:0043167 ion binding IEP Predicted GO
    MF GO:0043168 anion binding IEP Predicted GO
    BP GO:0043170 macromolecule metabolic process IEP Predicted GO
    CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
    CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
    BP GO:0043412 macromolecule modification IEP Predicted GO
    BP GO:0043543 protein acylation IEP Predicted GO
    BP GO:0043603 cellular amide metabolic process IEP Predicted GO
    BP GO:0043604 amide biosynthetic process IEP Predicted GO
    BP GO:0044237 cellular metabolic process IEP Predicted GO
    BP GO:0044238 primary metabolic process IEP Predicted GO
    BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
    BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
    BP GO:0044267 cellular protein metabolic process IEP Predicted GO
    CC GO:0044444 cytoplasmic part IEP Predicted GO
    BP GO:0045454 cell redox homeostasis IEP Predicted GO
    BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
    BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
    BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
    BP GO:0048878 chemical homeostasis IEP Predicted GO
    BP GO:0050789 regulation of biological process IEP Predicted GO
    BP GO:0050794 regulation of cellular process IEP Predicted GO
    BP GO:0050801 ion homeostasis IEP Predicted GO
    BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
    BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
    BP GO:0051604 protein maturation IEP Predicted GO
    BP GO:0055065 metal ion homeostasis IEP Predicted GO
    BP GO:0055072 iron ion homeostasis IEP Predicted GO
    BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
    BP GO:0055080 cation homeostasis IEP Predicted GO
    BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
    BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
    BP GO:0065007 biological regulation IEP Predicted GO
    BP GO:0065008 regulation of biological quality IEP Predicted GO
    BP GO:0071704 organic substance metabolic process IEP Predicted GO
    BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
    MF GO:0097159 organic cyclic compound binding IEP Predicted GO
    MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
    BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
    MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
    MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
    MF GO:1901363 heterocyclic compound binding IEP Predicted GO
    BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
    BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
    CC GO:1902493 acetyltransferase complex IEP Predicted GO
    BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
    BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
    BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
    CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
    BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

    No InterPro domains available for this sequence

    No external refs found!