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  5. PSME_00027277-RA

PSME_00027277-RA


Description : (at2g39650 : 175.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G38820.2); Has 395 Blast hits to 393 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 393; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 350.0) & (original description: no original description)


Gene families : OG_42_0000147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027277-RA
Cluster HCCA clusters: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
At2g39650 No alias At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813] 0.03 Orthogroups_2024-Update
Cre16.g693819 No alias Protein of unknown function (DUF506) 0.01 Orthogroups_2024-Update
HORVU3Hr1G093260.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00009130-RA No alias (at2g38820 : 145.0) Protein of unknown function (DUF506)... 0.04 Orthogroups_2024-Update
PSME_00049968-RA No alias (at3g07350 : 150.0) Protein of unknown function (DUF506)... 0.03 Orthogroups_2024-Update
Sobic.003G400200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 150 350
No external refs found!