1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00027297-RA

PSME_00027297-RA


Description : (at1g69040 : 462.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 924.0) & (original description: no original description)


Gene families : OG_42_0000251 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027297-RA
Cluster HCCA clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
A4A49_36705 No alias act domain-containing protein acr1 0.02 Orthogroups_2024-Update
At3g01990 No alias ACT domain repeat 6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSD7] 0.03 Orthogroups_2024-Update
Cre01.g012900 No alias ACT domain repeat 4 0.02 Orthogroups_2024-Update
Glyma.01G195500 No alias ACT domain repeat 1 0.03 Orthogroups_2024-Update
Glyma.06G120500 No alias ACT domain repeat 3 0.02 Orthogroups_2024-Update
PSME_00023900-RA No alias (at1g69040 : 309.0) ACT-domain containing protein... 0.05 Orthogroups_2024-Update
PSME_00036187-RA No alias (at1g69040 : 560.0) ACT-domain containing protein... 0.04 Orthogroups_2024-Update
PSME_00041665-RA No alias (at1g69040 : 502.0) ACT-domain containing protein... 0.05 Orthogroups_2024-Update
Seita.9G107200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G365800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G020700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g094300 No alias ACT domain-containing protein (AHRD V3.3 *-* A0A103Y4L4_CYNCS) 0.03 Orthogroups_2024-Update
Solyc08g007540 No alias ACT domain-containing family protein (AHRD V3.3 *** B9N3K8_POPTR) 0.03 Orthogroups_2024-Update
Sopen01g005560 No alias ACT domain 0.02 Orthogroups_2024-Update
Sopen02g036730 No alias ACT domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002912 ACT_dom 323 382
IPR002912 ACT_dom 104 157
No external refs found!