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  5. PSME_00027363-RA

PSME_00027363-RA


Description : (at5g54160 : 102.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zd89|omt1_orysa : 101.0) Quercetin 3-O-methyltransferase 1 precursor (EC 2.1.1.76) (Flavonol 3-O-methyltransferase 1) - Oryza sativa (Rice) & (reliability: 204.0) & (original description: no original description)


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027363-RA
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Bradi1g47030 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Brara.F01513.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Cre03.g148800 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
GRMZM2G100754 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.06G137300 No alias O-methyltransferase 1 0.02 Orthogroups_2024-Update
Glyma.06G295700 No alias O-methyltransferase 1 0.04 Orthogroups_2024-Update
HORVU1Hr1G076670.2 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
HORVU7Hr1G117710.10 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
MA_86945g0010 No alias (at5g54160 : 94.7) A caffeic acid/5-hydroxyferulic acid... 0.03 Orthogroups_2024-Update
PSME_00015141-RA No alias (q8w013|comt1_catro : 194.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00032996-RA No alias (q8w013|comt1_catro : 410.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00041946-RA No alias (o82054|comt1_sacof : 182.0) Caffeic acid... 0.03 Orthogroups_2024-Update
Sobic.007G059100.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Sobic.007G074800.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_2 57 132
IPR001077 O_MeTrfase_2 10 55
No external refs found!