PSME_00027420-RA

Description : (at5g11540 : 238.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: D-arabinono-1,4-lactone oxidase activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT2G46740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 476.0) & (original description: no original description)

Gene families : OG_42_0000298 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00027420-RA
Cluster	HCCA clusters: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
411796	No alias	D-arabinono-1,4-lactone oxidase family protein	0.02	Orthogroups_2024-Update
94673	No alias	D-arabinono-1,4-lactone oxidase family protein	0.02	Orthogroups_2024-Update
A4A49_00591	No alias	l-gulonolactone oxidase 3	0.02	Orthogroups_2024-Update
At2g46750	No alias	L-gulonolactone oxidase 2...	0.02	Orthogroups_2024-Update
Brara.B01267.1	No alias	L-gulono-1,4-lactone oxidase *(GULLO)	0.06	Orthogroups_2024-Update
Glyma.07G050900	No alias	D-arabinono-1,4-lactone oxidase family protein	0.03	Orthogroups_2024-Update
PSME_00020721-RA	No alias	(at2g46740 : 232.0) D-arabinono-1,4-lactone oxidase...	0.04	Orthogroups_2024-Update
PSME_00029638-RA	No alias	(at2g46760 : 632.0) D-arabinono-1,4-lactone oxidase...	0.02	Orthogroups_2024-Update
PSME_00030249-RA	No alias	(at2g46740 : 295.0) D-arabinono-1,4-lactone oxidase...	0.04	Orthogroups_2024-Update
PSME_00035698-RA	No alias	(at1g32300 : 231.0) D-arabinono-1,4-lactone oxidase...	0.05	Orthogroups_2024-Update
PSME_00044064-RA	No alias	(at2g46750 : 416.0) D-arabinono-1,4-lactone oxidase...	0.02	Orthogroups_2024-Update
PSME_00044474-RA	No alias	(at2g46740 : 125.0) D-arabinono-1,4-lactone oxidase...	0.04	Orthogroups_2024-Update
PSME_00050899-RA	No alias	(at2g46750 : 614.0) D-arabinono-1,4-lactone oxidase...	0.04	Orthogroups_2024-Update
Potri.018G039600	No alias	D-arabinono-1,4-lactone oxidase family protein	0.02	Orthogroups_2024-Update
Solyc08g068420	No alias	L-gulonolactone oxidase (AHRD V3.3 *** A0A151T9K5_CAJCA)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	InterProScan predictions
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006259	DNA metabolic process	IEP	Predicted GO
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
BP	GO:0042126	nitrate metabolic process	IEP	Predicted GO
BP	GO:0042128	nitrate assimilation	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
BP	GO:0071941	nitrogen cycle metabolic process	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	39	107

External Links

No external refs found!

PSME_00027420-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation