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  5. PSME_00027729-RA

PSME_00027729-RA


Description : (at1g22540 : 500.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink). & (reliability: 1000.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027729-RA
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
165561 No alias peptide transporter 1 0.01 Orthogroups_2024-Update
411211 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g43917 No alias peptide transporter 2 0.02 Orthogroups_2024-Update
Bradi5g20300 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G316889 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Glyma.01G200100 No alias nitrate transporter 1.5 0.02 Orthogroups_2024-Update
Glyma.04G256300 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G061000 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
Glyma.07G139100 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G053990.10 No alias nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR) 0.01 Orthogroups_2024-Update
HORVU7Hr1G106160.2 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
LOC_Os01g65210 No alias proton-dependent oligopeptide transport, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g01820.1 No alias anion transporter (NRT1/PTR) 0.02 Orthogroups_2024-Update
Pp1s171_7V6 No alias peptide transport-like protein 0.01 Orthogroups_2024-Update
Seita.3G231300.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.003G185100.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sobic.003G392700.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sobic.006G201100.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Solyc06g050900 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G40460.1) 0.03 Orthogroups_2024-Update
Sopen02g002840 No alias POT family 0.03 Orthogroups_2024-Update
Sopen08g003010 No alias POT family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 103 504
No external refs found!