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- PSME_00027747-RA
PSME_00027747-RA
Description : "(q7y1v5|c78ab_orysa : 610.0) Cytochrome P450 78A11 (EC 1.14.-.-) (Protein PLASTOCHRON1) - Oryza sativa (Rice) & (at5g09970 : 592.0) member of CYP78A; ""cytochrome P450, family 78, subfamily A, polypeptide 7"" (CYP78A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: regulation of meristem growth; EXPRESSED IN: embryo, leaf primordium, shoot lateral meristem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1184.0) & (original description: no original description)"
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00027747-RA | |
| Cluster | HCCA clusters: Cluster_52 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| At2g46660 | No alias | Cytochrome P450 78A6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNR0] | 0.04 | Orthogroups_2024-Update | |
| PSME_00054731-RA | No alias | "(q7y1v5|c78ab_orysa : 577.0) Cytochrome P450 78A11 (EC... | 0.06 | Orthogroups_2024-Update | |
| Potri.003G173500 | No alias | cytochrome P450, family 78, subfamily A, polypeptide 10 | 0.02 | Orthogroups_2024-Update | |
| Seita.9G257000.1 | No alias | EC_1.14 oxidoreductase acting on paired donor with... | 0.03 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005506 | iron ion binding | IEA | InterProScan predictions |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| MF | GO:0016491 | oxidoreductase activity | None | Extended |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEA | InterProScan predictions |
| MF | GO:0020037 | heme binding | IEA | InterProScan predictions |
| MF | GO:0043167 | ion binding | None | Extended |
| MF | GO:0043169 | cation binding | None | Extended |
| MF | GO:0046872 | metal ion binding | None | Extended |
| MF | GO:0046906 | tetrapyrrole binding | None | Extended |
| MF | GO:0046914 | transition metal ion binding | None | Extended |
| MF | GO:0048037 | cofactor binding | None | Extended |
| BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| BP | GO:0000723 | telomere maintenance | IEP | Predicted GO |
| MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| BP | GO:0032200 | telomere organization | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR001128 | Cyt_P450 | 80 | 525 |
