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  5. PSME_00027771-RA

PSME_00027771-RA


Description : (at1g65730 : 877.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 1598.0) & (original description: no original description)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027771-RA

Target Alias Description ECC score Gene Family Method Actions
At5g53550 No alias YSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178U7D6] 0.02 Orthogroups_2024-Update
Bradi5g08250 No alias YELLOW STRIPE like 6 0.03 Orthogroups_2024-Update
Bradi5g16160 No alias YELLOW STRIPE like 7 0.02 Orthogroups_2024-Update
GRMZM2G400570 No alias YELLOW STRIPE like 7 0.02 Orthogroups_2024-Update
HORVU6Hr1G061450.4 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
LOC_Os04g32050 No alias transposon protein, putative, unclassified, expressed 0.01 Orthogroups_2024-Update
PSME_00021866-RA No alias (at3g27020 : 523.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00044922-RA No alias (at1g65730 : 907.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.017G151600 No alias YELLOW STRIPE like 7 0.01 Orthogroups_2024-Update
Potri.017G151800 No alias YELLOW STRIPE like 7 0.02 Orthogroups_2024-Update
Seita.1G254300.1 No alias iron chelator transporter *(YSL) & ferric... 0.01 Orthogroups_2024-Update
Sobic.006G164300.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Solyc09g074960 No alias Yellow stripe 1A transporter (AHRD V3.3 *** A0A0K9P9K5_ZOSMR) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004813 OPT 74 694
No external refs found!