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  5. Solyc02g069730

Solyc02g069730


Description : CASP-like protein (AHRD V3.3 *** K4B7V5_SOLLC)


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g069730
Cluster HCCA clusters: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
A4A49_15920 No alias casparian strip membrane protein 1 0.03 Orthogroups_2024-Update
At4g15610 No alias CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE29] 0.03 Orthogroups_2024-Update
Potri.008G205100 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Seita.3G009500.1 No alias lignin polymerization scaffold protein *(CASP) 0.04 Orthogroups_2024-Update
Solyc03g097730 No alias CASP-like protein (AHRD V3.3 *** K4BJJ0_SOLLC) 0.03 Orthogroups_2024-Update
Solyc09g010200 No alias CASP-like protein (AHRD V3.3 *** K4CR48_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR006702 CASP_dom 21 171
No external refs found!