1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00027845-RA

PSME_00027845-RA


Description : (at1g13250 : 119.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 3 (GATL3); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase-like 4 (TAIR:AT3G06260.1); Has 2168 Blast hits to 2160 proteins in 496 species: Archae - 2; Bacteria - 1004; Metazoa - 285; Fungi - 17; Plants - 765; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description)


Gene families : OG_42_0000386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000386_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027845-RA
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
A4A49_20673 No alias putative galacturonosyltransferase-like 9 0.03 Orthogroups_2024-Update
At3g50760 No alias Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178V5S7] 0.03 Orthogroups_2024-Update
Brara.F03157.1 No alias galacturonosyltransferase 0.01 Orthogroups_2024-Update
PSME_00029725-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Sopen02g034570 No alias Glycosyl transferase family 8 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!