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  5. PSME_00027904-RA

PSME_00027904-RA


Description : (at1g06800 : 535.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G30550.1); Has 1442 Blast hits to 1434 proteins in 292 species: Archae - 0; Bacteria - 280; Metazoa - 45; Fungi - 278; Plants - 597; Viruses - 3; Other Eukaryotes - 239 (source: NCBI BLink). & (reliability: 1070.0) & (original description: no original description)


Gene families : OG_42_0000082 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027904-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
97883 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
A4A49_01141 No alias phospholipase a1-iidelta 0.04 Orthogroups_2024-Update
A4A49_15101 No alias phospholipase a1-ibeta2, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_15963 No alias phospholipase a1-igamma1, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_18741 No alias phospholipase a1-iigamma 0.04 Orthogroups_2024-Update
A4A49_30803 No alias phospholipase a1-iigamma 0.04 Orthogroups_2024-Update
A4A49_42852 No alias phospholipase a1-ii 1 0.03 Orthogroups_2024-Update
At1g51440 No alias Phospholipase A1-Igamma3, chloroplastic... 0.04 Orthogroups_2024-Update
Bradi2g45270 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00968.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Brara.A01852.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Brara.I02818.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Glyma.03G159000 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G205000 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G093400 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G044630.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G089140.2 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
LOC_Os01g46250 No alias lipase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g67430 No alias lipase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g49830 No alias lipase class 3 family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g19340 No alias lipase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10398182g0010 No alias (at1g06800 : 375.0) Encodes a lipase that hydrolyzes... 0.04 Orthogroups_2024-Update
MA_10426446g0010 No alias (at1g30370 : 270.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
MA_10429813g0010 No alias (at1g30370 : 391.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
MA_10430133g0010 No alias (at1g06800 : 469.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_10432434g0010 No alias (at1g06800 : 543.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_10435579g0020 No alias (at4g18550 : 348.0) alpha/beta-Hydrolases superfamily... 0.06 Orthogroups_2024-Update
MA_10435754g0010 No alias (at1g30370 : 235.0) alpha/beta-Hydrolases superfamily... 0.06 Orthogroups_2024-Update
MA_1516g0010 No alias (at2g30550 : 271.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_162516g0010 No alias (at2g30550 : 246.0) Encodes a lipase that hydrolyzes... 0.04 Orthogroups_2024-Update
MA_73124g0010 No alias (at1g51440 : 283.0) Encodes a lipase that hydrolyzes... 0.04 Orthogroups_2024-Update
MA_7986586g0010 No alias (at2g30550 : 246.0) Encodes a lipase that hydrolyzes... 0.05 Orthogroups_2024-Update
MA_8497143g0010 No alias (at2g30550 : 254.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
PSME_00007319-RA No alias (at2g30550 : 238.0) Encodes a lipase that hydrolyzes... 0.05 Orthogroups_2024-Update
PSME_00027668-RA No alias (at1g30370 : 171.0) alpha/beta-Hydrolases superfamily... 0.05 Orthogroups_2024-Update
PSME_00050034-RA No alias (at4g16820 : 374.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
PSME_00050880-RA No alias (at2g31690 : 334.0) encodes a triacylglycerol lipase... 0.04 Orthogroups_2024-Update
PSME_00054288-RA No alias (at1g06800 : 337.0) Encodes a lipase that hydrolyzes... 0.05 Orthogroups_2024-Update
PSME_00055800-RA No alias (at4g16820 : 366.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
Potri.001G153100 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G263200 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G057900 No alias alpha/beta-Hydrolases superfamily protein 0.05 Orthogroups_2024-Update
Potri.015G026400 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G026500 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G063700.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Seita.5G132200.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Seita.5G416000.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Seita.9G320000.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
Sobic.003G274700.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
Sobic.004G297600.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Sobic.005G111400.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Solyc02g076990 No alias Phospholipase A1 (AHRD V3.3 *** A5YW95_CAPAN) 0.04 Orthogroups_2024-Update
Solyc02g077100 No alias Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g003090 No alias Lipase (class 3) 0.03 Orthogroups_2024-Update
Sopen02g021960 No alias Lipase (class 3) 0.03 Orthogroups_2024-Update
Sopen02g022050 No alias Lipase (class 3) 0.05 Orthogroups_2024-Update
Sopen02g022320 No alias Lipase (class 3) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 222 382
No external refs found!