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  5. PSME_00027915-RA

PSME_00027915-RA


Description : (at1g15890 : 191.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43730.1); Has 17730 Blast hits to 16510 proteins in 695 species: Archae - 12; Bacteria - 829; Metazoa - 2844; Fungi - 202; Plants - 13567; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink). & (reliability: 356.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027915-RA
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
At1g12280 No alias Disease resistance protein SUMM2... 0.03 Orthogroups_2024-Update
At4g27220 No alias NB-ARC domain-containing disease resistance protein... 0.03 Orthogroups_2024-Update
Brara.F00322.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I01184.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I03326.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G089020.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10059887g0010 No alias (at1g12220 : 207.0) Resistance gene, mediates resistance... 0.03 Orthogroups_2024-Update
MA_10062820g0010 No alias (at1g12280 : 143.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
MA_10426603g0010 No alias (at4g27220 : 233.0) NB-ARC domain-containing disease... 0.03 Orthogroups_2024-Update
MA_10426937g0020 No alias (at4g26090 : 162.0) Encodes a plasma membrane protein... 0.03 Orthogroups_2024-Update
MA_10436071g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_53162g0020 No alias (at5g43740 : 114.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_549555g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_8325275g0010 No alias (at1g12220 : 93.2) Resistance gene, mediates resistance... 0.03 Orthogroups_2024-Update
MA_8869735g0010 No alias (at1g61300 : 128.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00000174-RA No alias (at1g63350 : 147.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00004005-RA No alias (at1g15890 : 219.0) Disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00004450-RA No alias (at4g10780 : 156.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00004922-RA No alias (at1g12280 : 266.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00005482-RA No alias (at4g27220 : 208.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
PSME_00011883-RA No alias (at4g27220 : 218.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
PSME_00037099-RA No alias (at4g26090 : 230.0) Encodes a plasma membrane protein... 0.04 Orthogroups_2024-Update
PSME_00040940-RA No alias (at1g12220 : 181.0) Resistance gene, mediates resistance... 0.04 Orthogroups_2024-Update
PSME_00043407-RA No alias (at4g26090 : 135.0) Encodes a plasma membrane protein... 0.03 Orthogroups_2024-Update
PSME_00043408-RA No alias (at1g63350 : 110.0) Disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00045260-RA No alias (at1g12220 : 264.0) Resistance gene, mediates resistance... 0.04 Orthogroups_2024-Update
PSME_00048940-RA No alias (at4g27220 : 141.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
PSME_00051570-RA No alias (at4g27220 : 246.0) NB-ARC domain-containing disease... 0.03 Orthogroups_2024-Update
PSME_00053148-RA No alias (at1g12210 : 218.0) RFL1 has high sequence similarity to... 0.04 Orthogroups_2024-Update
Potri.019G002800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T013900 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Potri.T024900 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T026800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.2G176400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 504 562
IPR002182 NB-ARC 201 369
No external refs found!