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  5. PSME_00027930-RA

PSME_00027930-RA


Description : (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (p20026|myb1_horvu : 252.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (reliability: 506.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027930-RA
Cluster HCCA clusters: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
A4A49_11057 No alias transcription factor myb86 0.03 Orthogroups_2024-Update
Bradi2g05740 No alias myb domain protein 37 0.03 Orthogroups_2024-Update
Bradi2g47590 No alias myb domain protein 86 0.05 Orthogroups_2024-Update
Bradi4g29796 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Bradi4g36460 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Bradi5g15246 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Brara.A03255.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.F03109.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.G02641.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G037650 No alias myb domain protein 42 0.02 Orthogroups_2024-Update
GRMZM2G084583 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
GRMZM2G117244 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
Glyma.01G211500 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.06G300300 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.15G041100 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.17G231900 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g36890 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g07510.1 No alias transcription factor (MYB) 0.03 Orthogroups_2024-Update
PSME_00052407-RA No alias (at4g09460 : 211.0) Encodes myb6 DNA-binding protein.;... 0.04 Orthogroups_2024-Update
PSME_00052982-RA No alias (p20025|myb38_maize : 241.0) Myb-related protein Zm38 -... 0.03 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Pp1s284_57V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.2G404100.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G385450.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G248700.1 No alias MYB class-R2R3 transcription factor 0.06 Orthogroups_2024-Update
Sobic.006G159100.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Solyc01g111500 No alias R2R3MYB transcription factor 7 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!