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  5. Solyc02g069740

Solyc02g069740


Description : Transcription factor jumonji family protein (AHRD V3.3 *** D7MFJ7_ARALL)


Gene families : OG_42_0001408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g069740
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At2g34880 No alias Lysine-specific demethylase JMJ15... 0.03 Orthogroups_2024-Update
HORVU1Hr1G093770.7 No alias histone demethylase *(PKDM7) 0.03 Orthogroups_2024-Update
LOC_Os05g10770 No alias transcription factor jumonji, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G440900 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003888 FYrich_N 680 723
IPR003889 FYrich_C 730 818
IPR003349 JmjN 45 78
IPR003347 JmjC_dom 275 390
IPR004198 Znf_C5HC2 498 550
No external refs found!