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  5. PSME_00027988-RA

PSME_00027988-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00027988-RA
Cluster HCCA clusters: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
At2g38820 No alias Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820] 0.02 Orthogroups_2024-Update
At2g39650 No alias At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813] 0.03 Orthogroups_2024-Update
Bradi2g62310 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
Brara.D02362.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E03214.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.K00029.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G030350 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
Glyma.01G231800 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
Glyma.07G197100 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Glyma.10G031300 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Glyma.13G179200 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Glyma.15G074800 No alias Protein of unknown function (DUF506) 0.04 Orthogroups_2024-Update
HORVU3Hr1G071220.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10117499g0010 No alias (at3g07350 : 151.0) Protein of unknown function (DUF506)... 0.03 Orthogroups_2024-Update
PSME_00002726-RA No alias (at2g38820 : 156.0) Protein of unknown function (DUF506)... 0.05 Orthogroups_2024-Update
PSME_00032647-RA No alias (at4g14620 : 141.0) Protein of unknown function (DUF506)... 0.04 Orthogroups_2024-Update
PSME_00049968-RA No alias (at3g07350 : 150.0) Protein of unknown function (DUF506)... 0.05 Orthogroups_2024-Update
Potri.004G001400 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Potri.011G053300 No alias Protein of unknown function (DUF506) 0.06 Orthogroups_2024-Update
Potri.019G074400 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
Pp1s175_78V6 No alias FCAALL.275; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s59_101V6 No alias F5N5.17; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.9G263700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g078160 No alias DUF506 family protein (AHRD V3.3 *** G7IPT8_MEDTR) 0.02 Orthogroups_2024-Update
Solyc11g042630 No alias DUF506 family protein (AHRD V3.3 *** G7K973_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 90 171
No external refs found!