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  5. PSME_00028022-RA

PSME_00028022-RA


Description : (at2g44480 : 488.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49235|bglc_maize : 433.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 892.0) & (original description: no original description)


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028022-RA
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
127964 No alias beta glucosidase 40 0.02 Orthogroups_2024-Update
At1g60270 No alias Putative beta-glucosidase 6... 0.03 Orthogroups_2024-Update
At2g44480 No alias beta glucosidase 17 [Source:TAIR;Acc:AT2G44480] 0.03 Orthogroups_2024-Update
At3g60120 No alias Beta-glucosidase 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1D1] 0.03 Orthogroups_2024-Update
Bradi1g42690 No alias beta glucosidase 12 0.04 Orthogroups_2024-Update
Brara.D00057.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.D00183.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.E01378.1 No alias EC_3.2 glycosylase & scopolin-hydrolizing beta-glycosyl... 0.03 Orthogroups_2024-Update
Brara.F02147.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
GRMZM2G076946 No alias beta glucosidase 15 0.02 Orthogroups_2024-Update
GRMZM2G108133 No alias beta glucosidase 11 0.02 Orthogroups_2024-Update
Glyma.11G129500 No alias beta glucosidase 13 0.04 Orthogroups_2024-Update
Glyma.12G054000 No alias beta glucosidase 17 0.02 Orthogroups_2024-Update
Glyma.15G031400 No alias beta glucosidase 15 0.03 Orthogroups_2024-Update
HORVU0Hr1G031760.1 No alias beta-glucosidase involved in pollen intine formation &... 0.03 Orthogroups_2024-Update
HORVU2Hr1G082170.12 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os07g46280 No alias Os7bglu26 - beta-mannosidase/glucosidase/exoglucanase, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g39870 No alias Os8bglu28 - beta-glucosidase homologue, similar to... 0.02 Orthogroups_2024-Update
MA_952732g0010 No alias (at5g54570 : 375.0) beta glucosidase 41 (BGLU41);... 0.04 Orthogroups_2024-Update
Mp2g13770.1 No alias Beta-glucosidase 11 OS=Oryza sativa subsp. japonica... 0.03 Orthogroups_2024-Update
PSME_00005179-RA No alias (at3g18080 : 704.0) B-S glucosidase 44 (BGLU44);... 0.03 Orthogroups_2024-Update
PSME_00013802-RA No alias (at4g21760 : 416.0) beta-glucosidase 47 (BGLU47);... 0.03 Orthogroups_2024-Update
PSME_00016473-RA No alias (at1g02850 : 300.0) beta glucosidase 11 (BGLU11);... 0.03 Orthogroups_2024-Update
PSME_00019735-RA No alias (at1g26560 : 751.0) beta glucosidase 40 (BGLU40);... 0.02 Orthogroups_2024-Update
Potri.001G409900 No alias beta glucosidase 41 0.02 Orthogroups_2024-Update
Potri.004G019500 No alias beta glucosidase 46 0.02 Orthogroups_2024-Update
Potri.004G019700 No alias beta glucosidase 46 0.02 Orthogroups_2024-Update
Sobic.010G240300.1 No alias beta-glucosidase involved in pollen intine formation &... 0.02 Orthogroups_2024-Update
Sopen02g024990 No alias Glycosyl hydrolase family 1 0.02 Orthogroups_2024-Update
Sopen02g025000 No alias Glycosyl hydrolase family 1 0.02 Orthogroups_2024-Update
Sopen03g005600 No alias Glycosyl hydrolase family 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 49 520
No external refs found!