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Description : (at4g02750 : 549.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 164.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1098.0) & (original description: no original description)
Gene families : OG_42_0011490 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011490_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00028093-RA | |
| Cluster | HCCA clusters: Cluster_250 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 109195 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004497 | monooxygenase activity | IEP | Predicted GO |
| MF | GO:0004506 | squalene monooxygenase activity | IEP | Predicted GO |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Predicted GO |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 211 | 259 |
| IPR002885 | Pentatricopeptide_repeat | 630 | 678 |
| IPR002885 | Pentatricopeptide_repeat | 530 | 577 |
| IPR002885 | Pentatricopeptide_repeat | 111 | 158 |
| IPR032867 | DYW_dom | 804 | 873 |
| IPR002885 | Pentatricopeptide_repeat | 471 | 499 |
| IPR002885 | Pentatricopeptide_repeat | 85 | 110 |
| IPR002885 | Pentatricopeptide_repeat | 377 | 406 |
| IPR002885 | Pentatricopeptide_repeat | 284 | 309 |
| IPR002885 | Pentatricopeptide_repeat | 315 | 344 |
| IPR002885 | Pentatricopeptide_repeat | 346 | 376 |
| IPR002885 | Pentatricopeptide_repeat | 501 | 528 |
| IPR002885 | Pentatricopeptide_repeat | 439 | 464 |
| IPR002885 | Pentatricopeptide_repeat | 409 | 437 |
| IPR002885 | Pentatricopeptide_repeat | 705 | 729 |
| No external refs found! |