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  5. PSME_00028241-RA

PSME_00028241-RA


Description : (at1g63640 : 196.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (TAIR:AT5G41310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description)


Gene families : OG_42_0000091 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028241-RA
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G027900.3 No alias Kinesin-14-type motor protein 0.02 Orthogroups_2024-Update
LOC_Os05g44560 No alias kinesin motor domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10436652g0020 No alias (at2g22610 : 280.0) Di-glucose binding protein with... 0.03 Orthogroups_2024-Update
PSME_00013726-RA No alias (at3g44730 : 236.0) kinesin-like protein 1 (KP1);... 0.05 Orthogroups_2024-Update
PSME_00015827-RA No alias (at2g22610 : 572.0) Di-glucose binding protein with... 0.02 Orthogroups_2024-Update
PSME_00030296-RA No alias (at3g44730 : 220.0) kinesin-like protein 1 (KP1);... 0.03 Orthogroups_2024-Update
PSME_00046213-RA No alias (at2g47500 : 425.0) P-loop nucleoside triphosphate... 0.03 Orthogroups_2024-Update
PSME_00047206-RA No alias (at2g47500 : 397.0) P-loop nucleoside triphosphate... 0.04 Orthogroups_2024-Update
PSME_00056742-RA No alias (at5g27000 : 529.0) Encodes a kinesin-like protein that... 0.01 Orthogroups_2024-Update
Sobic.006G112800.1 No alias Kinesin-14-type motor protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008017 microtubule binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR031852 Vik1/Cik1_MT-bd 18 173
No external refs found!