PSME_00028284-RA

Description : (at2g24280 : 260.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, lysosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT5G65760.1); Has 1253 Blast hits to 1217 proteins in 170 species: Archae - 0; Bacteria - 7; Metazoa - 611; Fungi - 189; Plants - 249; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (reliability: 520.0) & (original description: no original description)

Gene families : OG_42_0005670 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005670_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00028284-RA
Cluster	HCCA clusters: Cluster_70

Target	Alias	Description	ECC score	Gene Family Method
Glyma.01G065400	No alias	Serine carboxypeptidase S28 family protein	0.03	Orthogroups_2024-Update
MA_10430728g0010	No alias	(at5g22860 : 332.0) Serine carboxypeptidase S28 family...	0.04	Orthogroups_2024-Update
Potri.001G212900	No alias	Serine carboxypeptidase S28 family protein	0.03	Orthogroups_2024-Update
Solyc11g066590	No alias	Lysosomal Pro-X carboxypeptidase, putative (AHRD V3.3...	0.04	Orthogroups_2024-Update
Sopen11g026330	No alias	Serine carboxypeptidase S28	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Predicted GO
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Predicted GO
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR008758	Peptidase_S28	332	411
IPR008758	Peptidase_S28	87	294

External Links

No external refs found!

PSME_00028284-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation