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  5. PSME_00028295-RA

PSME_00028295-RA


Description : (at3g53960 : 506.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 962.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028295-RA
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
411211 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
84173 No alias peptide transporter 1 0.03 Orthogroups_2024-Update
A4A49_23336 No alias protein nrt1 ptr family 7.3 0.03 Orthogroups_2024-Update
A4A49_28129 No alias protein nrt1 ptr family 5.7 0.03 Orthogroups_2024-Update
A4A49_37441 No alias protein nrt1 ptr family 6.3 0.03 Orthogroups_2024-Update
At1g32450 No alias Protein NRT1/ PTR FAMILY 7.3... 0.03 Orthogroups_2024-Update
At1g72130 No alias Protein NRT1/ PTR FAMILY 5.11... 0.02 Orthogroups_2024-Update
At1g72140 No alias Protein NRT1/ PTR FAMILY 5.12... 0.05 Orthogroups_2024-Update
At2g26690 No alias Protein NRT1/ PTR FAMILY 6.2... 0.04 Orthogroups_2024-Update
At3g53960 No alias Protein NRT1/ PTR FAMILY 5.7... 0.02 Orthogroups_2024-Update
At5g46050 No alias Protein NRT1/ PTR FAMILY 5.2... 0.02 Orthogroups_2024-Update
Bradi2g24327 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g30380 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g28410 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Bradi5g20310 No alias peptide transporter 2 0.02 Orthogroups_2024-Update
Brara.A02760.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.E00726.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.G01280.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Glyma.11G224233 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G064900 No alias peptide transporter 1 0.03 Orthogroups_2024-Update
Glyma.20G206300 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Glyma.20G247400 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G010570.2 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
HORVU5Hr1G114330.2 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Kfl00057_0100 kfl00057_0100_v1.... (at5g01180 : 590.0) Encodes a dipeptide transporter... 0.01 Orthogroups_2024-Update
LOC_Os03g01290 No alias peptide transporter PTR2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g50950 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
MA_10436042g0010 No alias (at3g54140 : 356.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
MA_135648g0010 No alias (at1g32450 : 667.0) Transmembrane nitrate transporter.... 0.06 Orthogroups_2024-Update
MA_54821g0010 No alias (at3g54140 : 359.0) Encodes a di- and tri-peptide... 0.08 Orthogroups_2024-Update
PSME_00017179-RA No alias (at3g54140 : 790.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00017195-RA No alias (at3g54140 : 821.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00051182-RA No alias (at3g53960 : 401.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Potri.001G145200 No alias nitrate transporter 1.5 0.03 Orthogroups_2024-Update
Potri.003G111500 No alias nitrate transporter 1.1 0.03 Orthogroups_2024-Update
Potri.008G061100 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G055800 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Pp1s114_7V6 No alias peptide transporter 0.03 Orthogroups_2024-Update
Seita.5G195000.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Seita.5G282900.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Seita.9G314800.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sobic.001G275500.2 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sobic.002G000800.2 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sobic.003G185100.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Solyc02g021240 No alias oligopeptide transporter 1 0.03 Orthogroups_2024-Update
Sopen01g036930 No alias POT family 0.06 Orthogroups_2024-Update
Sopen06g016590 No alias POT family 0.02 Orthogroups_2024-Update
Sopen07g024620 No alias POT family 0.03 Orthogroups_2024-Update
Sopen09g001330 No alias POT family 0.02 Orthogroups_2024-Update
Sopen10g034410 No alias POT family 0.03 Orthogroups_2024-Update
Sopen12g002020 No alias POT family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019211 phosphatase activator activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 144 574
No external refs found!