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  5. PSME_00028323-RA

PSME_00028323-RA


Description : (at4g39700 : 182.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028323-RA
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
442871 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
At1g23000 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update
Brara.G01687.1 No alias copper chaperone *(ATX/CCH) 0.03 Orthogroups_2024-Update
GRMZM2G085086 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G025770.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g61070 No alias heavy metal-associated domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_927203g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00018078-RA No alias (at4g39700 : 206.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
PSME_00035558-RA No alias (at4g39700 : 119.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Pp1s69_239V6 No alias metal ion binding 0.03 Orthogroups_2024-Update
Seita.3G037000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.8G028400.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 36 89
No external refs found!