PSME_00028375-RA

Description : (at5g06710 : 210.0) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 390.0) & (original description: no original description)

Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00028375-RA
Cluster	HCCA clusters: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15384	No alias	homeobox-leucine zipper protein hat14	0.04	Orthogroups_2024-Update
At4g37790	No alias	Homeobox-leucine zipper protein HAT22...	0.02	Orthogroups_2024-Update
Brara.A00117.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B03044.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G047715	No alias	homeobox from Arabidopsis thaliana	0.03	Orthogroups_2024-Update
GRMZM2G068672	No alias	homeobox protein 2	0.03	Orthogroups_2024-Update
Glyma.03G114300	No alias	homeobox-leucine zipper protein 3	0.02	Orthogroups_2024-Update
Glyma.05G062700	No alias	homeobox protein 2	0.03	Orthogroups_2024-Update
Glyma.05G109500	No alias	Homeobox-leucine zipper protein family	0.03	Orthogroups_2024-Update
Glyma.15G168800	No alias	homeobox from Arabidopsis thaliana	0.02	Orthogroups_2024-Update
LOC_Os03g12860	No alias	homeobox associated leucine zipper, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g04870	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g41230	No alias	homeobox associated leucine zipper, putative, expressed	0.04	Orthogroups_2024-Update
MA_194299g0010	No alias	(at5g06710 : 199.0) Homeobox-leucine zipper protein.;...	0.03	Orthogroups_2024-Update
MA_21460g0010	No alias	(at5g06710 : 130.0) Homeobox-leucine zipper protein.;...	0.05	Orthogroups_2024-Update
MA_60457g0010	No alias	(at5g06710 : 208.0) Homeobox-leucine zipper protein.;...	0.04	Orthogroups_2024-Update
PSME_00038042-RA	No alias	(at5g06710 : 121.0) Homeobox-leucine zipper protein.;...	0.04	Orthogroups_2024-Update
Potri.003G079800	No alias	homeobox protein 2	0.03	Orthogroups_2024-Update
Potri.006G193700	No alias	homeobox from Arabidopsis thaliana	0.03	Orthogroups_2024-Update
Potri.010G112600	No alias	homeobox-leucine zipper protein 17	0.03	Orthogroups_2024-Update
Seita.5G241600.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Seita.9G301000.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G297200.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Solyc01g090460	No alias	HD-ZIP	0.02	Orthogroups_2024-Update
Solyc05g008050	No alias	Homeobox associated leucine zipper protein (AHRD V3.3...	0.04	Orthogroups_2024-Update
Sopen06g020980	No alias	HD-ZIP protein N terminus	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Predicted GO
MF	GO:0004559	alpha-mannosidase activity	IEP	Predicted GO
BP	GO:0006013	mannose metabolic process	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
MF	GO:0015923	mannosidase activity	IEP	Predicted GO
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predicted GO
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	223	257
IPR001356	Homeobox_dom	167	221

External Links

No external refs found!

PSME_00028375-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation