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  5. PSME_00028376-RA

PSME_00028376-RA


Description : (at3g48090 : 203.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)


Gene families : OG_42_0000580 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028376-RA
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
A4A49_12345 No alias senescence-associated carboxylesterase 101 0.02 Orthogroups_2024-Update
Glyma.19G013200 No alias senescence-associated gene 101 0.04 Orthogroups_2024-Update
PSME_00016196-RA No alias (at3g48090 : 125.0) Component of R gene-mediated disease... 0.02 Orthogroups_2024-Update
PSME_00037067-RA No alias (at3g48090 : 130.0) Component of R gene-mediated disease... 0.02 Orthogroups_2024-Update
PSME_00045985-RA No alias (at3g48090 : 137.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00046982-RA No alias (at3g52430 : 199.0) Encodes a lipase-like gene that is... 0.03 Orthogroups_2024-Update
PSME_00054488-RA No alias (at3g48090 : 129.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
Sopen02g018550 No alias Lipase (class 3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 69 197
No external refs found!