1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00028701-RA

PSME_00028701-RA


Description : (at2g02040 : 778.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.; peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (reliability: 1556.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028701-RA
Cluster HCCA clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
At3g54140 No alias Protein NRT1/ PTR FAMILY 8.1... 0.02 Orthogroups_2024-Update
Bradi1g72910 No alias peptide transporter 2 0.02 Orthogroups_2024-Update
Brara.G00995.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.G02373.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
GRMZM2G472167 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Glyma.18G033800 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G054020.3 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
HORVU2Hr1G001320.4 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
HORVU2Hr1G001380.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Kfl00057_0100 kfl00057_0100_v1.... (at5g01180 : 590.0) Encodes a dipeptide transporter... 0.01 Orthogroups_2024-Update
LOC_Os01g65210 No alias proton-dependent oligopeptide transport, putative, expressed 0.02 Orthogroups_2024-Update
MA_119405g0010 No alias (at2g02040 : 772.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
Pp1s143_133V6 No alias F7J8.160; oligopeptide transporter - like protein... 0.02 Orthogroups_2024-Update
Seita.3G231300.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sopen06g033130 No alias POT family 0.02 Orthogroups_2024-Update
Sopen08g025720 No alias POT family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 118 550
No external refs found!