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  5. PSME_00028873-RA

PSME_00028873-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000282 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028873-RA
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
Brara.A03685.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.05G211600 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G177900 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G178100 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G178400 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G178500 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G252800 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os04g57200 No alias heavy metal transport/detoxification protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_132265g0010 No alias no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
MA_132265g0020 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_18139g0010 No alias no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
MA_22012g0010 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_23882g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_808345g0010 No alias no hits & (original description: no original description) 0.11 Orthogroups_2024-Update
MA_8368223g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_867509g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_906240g0010 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_944861g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.001G099500 No alias Heavy metal transport/detoxification superfamily protein 0.05 Orthogroups_2024-Update
Potri.003G132200 No alias Copper transport protein family 0.03 Orthogroups_2024-Update
Potri.004G073100 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Potri.005G120200 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G089700 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G147000 No alias Heavy metal transport/detoxification superfamily protein 0.07 Orthogroups_2024-Update
Seita.3G030500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G570800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G251400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G257700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc06g036310 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update
Sopen02g029610 No alias Heavy-metal-associated domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 16 56
IPR006121 HMA_dom 105 143
No external refs found!