PSME_00028885-RA

Description : (at5g15130 : 194.0) member of WRKY Transcription Factor; Group II-b; contribute to basal immunity.; WRKY DNA-binding protein 72 (WRKY72); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 61 (TAIR:AT1G18860.1); Has 6758 Blast hits to 4151 proteins in 378 species: Archae - 0; Bacteria - 669; Metazoa - 395; Fungi - 387; Plants - 3478; Viruses - 9; Other Eukaryotes - 1820 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00028885-RA
Cluster	HCCA clusters: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
29146	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
81371	No alias	WRKY DNA-binding protein 9	0.02	Orthogroups_2024-Update
A4A49_27487	No alias	putative wrky transcription factor 23	0.04	Orthogroups_2024-Update
A4A49_40108	No alias	putative wrky transcription factor 51	0.03	Orthogroups_2024-Update
At1g18860	No alias	WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]	0.03	Orthogroups_2024-Update
At4g39410	No alias	WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]	0.04	Orthogroups_2024-Update
At5g49520	No alias	Probable WRKY transcription factor 48...	0.02	Orthogroups_2024-Update
At5g56270	No alias	Probable WRKY transcription factor 2...	0.03	Orthogroups_2024-Update
Bradi2g00280	No alias	WRKY DNA-binding protein 26	0.02	Orthogroups_2024-Update
Bradi2g08620	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Bradi2g11170	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Bradi2g18530	No alias	WRKY DNA-binding protein 51	0.05	Orthogroups_2024-Update
Bradi2g33540	No alias	WRKY DNA-binding protein 50	0.03	Orthogroups_2024-Update
Bradi4g01950	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Bradi4g19060	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Bradi4g44342	No alias	WRKY DNA-binding protein 70	0.04	Orthogroups_2024-Update
Bradi5g17395	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Brara.A00933.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B01850.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B02409.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C01871.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C02090.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C02964.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D00225.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.E00458.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00682.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.E00945.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F01311.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F02353.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.F03381.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H00940.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00057.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00520.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I02789.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I04309.1	No alias	WRKY-type transcription factor & component *(MED19) of...	0.02	Orthogroups_2024-Update
Brara.K00459.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G025895	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G083350	No alias	WRKY DNA-binding protein 72	0.02	Orthogroups_2024-Update
Glyma.01G043300	No alias	WRKY DNA-binding protein 72	0.02	Orthogroups_2024-Update
Glyma.01G128100	No alias	WRKY DNA-binding protein 33	0.04	Orthogroups_2024-Update
Glyma.02G232600	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Glyma.03G042700	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Glyma.04G218700	No alias	WRKY DNA-binding protein 51	0.02	Orthogroups_2024-Update
Glyma.05G123000	No alias	WRKY DNA-binding protein 9	0.02	Orthogroups_2024-Update
Glyma.05G211900	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.06G054500	No alias	WRKY DNA-binding protein 50	0.02	Orthogroups_2024-Update
Glyma.07G227200	No alias	WRKY DNA-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.08G143400	No alias	WRKY DNA-binding protein 13	0.03	Orthogroups_2024-Update
Glyma.08G320200	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.10G138300	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Glyma.12G212300	No alias	WRKY DNA-binding protein 69	0.03	Orthogroups_2024-Update
Glyma.14G200200	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.15G003300	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
Glyma.17G042300	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.19G217000	No alias	WRKY DNA-binding protein 35	0.04	Orthogroups_2024-Update
Glyma.19G217800	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
HORVU1Hr1G090110.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU1Hr1G092130.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G088200.5	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g61080	No alias	WRKY24, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g20550	No alias	WRKY55, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g49620	No alias	WRKY19, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g44010	No alias	WRKY28, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g29660	No alias	WRKY69, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g18099	No alias	WRKY18, expressed	0.02	Orthogroups_2024-Update
MA_103616g0010	No alias	(at4g22070 : 256.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_10432362g0010	No alias	(at1g69310 : 113.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
MA_126273g0010	No alias	(at1g69310 : 166.0) member of WRKY Transcription Factor;...	0.06	Orthogroups_2024-Update
MA_138256g0010	No alias	(at1g30650 : 163.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_14480g0020	No alias	(at1g62300 : 173.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
MA_17107g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_179641g0010	No alias	(at1g29860 : 118.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_22356g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_46529g0010	No alias	(at1g62300 : 139.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
MA_54954g0010	No alias	(at5g26170 : 109.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
MA_6177g0010	No alias	(at4g11070 : 114.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
MA_74833g0010	No alias	(at5g15130 : 181.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
MA_934202g0010	No alias	(at1g62300 : 149.0) Encodes a transcription factor...	0.04	Orthogroups_2024-Update
PSME_00011302-RA	No alias	(at4g01720 : 92.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
PSME_00021156-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00040311-RA	No alias	no hits & (original description: no original description)	0.06	Orthogroups_2024-Update
PSME_00041150-RA	No alias	(at4g04450 : 119.0) member of WRKY Transcription Factor;...	0.06	Orthogroups_2024-Update
PSME_00041689-RA	No alias	(at1g29860 : 111.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
PSME_00049059-RA	No alias	(at1g29860 : 114.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Potri.001G092900	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.001G361600	No alias	WRKY family transcription factor family protein	0.03	Orthogroups_2024-Update
Potri.001G460600	No alias	WRKY DNA-binding protein 14	0.03	Orthogroups_2024-Update
Potri.002G164900	No alias	WRKY DNA-binding protein 43	0.03	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Potri.006G105300	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Potri.008G103300	No alias	WRKY DNA-binding protein 48	0.03	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Potri.016G128300	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Potri.016G137900	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Pp1s115_10V6	No alias	wrky transcription	0.03	Orthogroups_2024-Update
Pp1s135_80V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Pp1s198_83V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.02	Orthogroups_2024-Update
Pp1s235_126V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.03	Orthogroups_2024-Update
Pp1s35_401V6	No alias	wrky transcription	0.06	Orthogroups_2024-Update
Pp1s39_217V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Seita.2G206000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.2G248500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.3G054500.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G108500.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.3G170400.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G206900.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G132800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G294500.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G306000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G307700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.7G302000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.8G012800.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G174200.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G037400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G248400.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G276000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G013600.2	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G117400.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G217700.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G068900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G247300.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G209200.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Solyc01g079360	No alias	WRKY transcription factor 37	0.02	Orthogroups_2024-Update
Solyc03g095770	No alias	WRKY transcription factor 80	0.03	Orthogroups_2024-Update
Solyc05g012770	No alias	WRKY transcription factor 4	0.04	Orthogroups_2024-Update
Solyc06g070990	No alias	WRKY transcription factor 74	0.04	Orthogroups_2024-Update
Solyc08g008280	No alias	WRKY transcription factor 53	0.03	Orthogroups_2024-Update
Solyc08g067340	No alias	WRKY transcription factor 46	0.03	Orthogroups_2024-Update
Solyc10g005680	No alias	WRKY transcription factor 15	0.04	Orthogroups_2024-Update
Sopen01g031040	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen01g039380	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen02g033030	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen03g035820	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen05g007320	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen05g007580	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen08g004130	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006887	exocytosis	IEP	Predicted GO
BP	GO:0016192	vesicle-mediated transport	IEP	Predicted GO
BP	GO:0032940	secretion by cell	IEP	Predicted GO
CC	GO:0044448	cell cortex part	IEP	Predicted GO
BP	GO:0046903	secretion	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
CC	GO:0099023	tethering complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	351	408

External Links

No external refs found!

PSME_00028885-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation