1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00028911-RA

PSME_00028911-RA


Description : "(at2g46950 : 288.0) member of CYP709B; ""cytochrome P450, family 709, subfamily B, polypeptide 2"" (CYP709B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 3 (TAIR:AT4G27710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q05047|c72a1_catro : 233.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 522.0) & (original description: no original description)"


Gene families : OG_42_0000028 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00028911-RA

Target Alias Description ECC score Gene Family Method Actions
171715 No alias cytochrome P450, family 709, subfamily B, polypeptide 2 0.02 Orthogroups_2024-Update
441298 No alias cytochrome P450, family 709, subfamily B, polypeptide 2 0.02 Orthogroups_2024-Update
94541 No alias cytochrome P450, family 709, subfamily B, polypeptide 2 0.02 Orthogroups_2024-Update
A4A49_23631 No alias cytochrome p450 cyp72a219 0.03 Orthogroups_2024-Update
At1g17060 No alias cytochrome p450 72c1 [Source:TAIR;Acc:AT1G17060] 0.03 Orthogroups_2024-Update
Bradi1g06030 No alias cytochrome P450, family 72, subfamily A, polypeptide 14 0.03 Orthogroups_2024-Update
Bradi1g61420 No alias cytochrome P450, family 709, subfamily B, polypeptide 2 0.03 Orthogroups_2024-Update
Bradi3g40710 No alias cytochrome P450, family 709, subfamily B, polypeptide 2 0.03 Orthogroups_2024-Update
Bradi4g36680 No alias cytochrome P450, family 709, subfamily B, polypeptide 2 0.03 Orthogroups_2024-Update
Brara.F03199.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
GRMZM2G138750 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G088200 No alias cytochrome P450, family 721, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Kfl00468_0120 kfl00468_0120_v1.... "(at2g46950 : 275.0) member of CYP709B; ""cytochrome... 0.02 Orthogroups_2024-Update
LOC_Os03g25500 No alias cytochrome P450 72A1, putative, expressed 0.02 Orthogroups_2024-Update
MA_10397579g0010 No alias "(at5g38450 : 162.0) member of CYP709A; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_141669g0010 No alias (at2g26710 : 457.0) Encodes a member of the cytochrome... 0.04 Orthogroups_2024-Update
MA_3670g0010 No alias (at2g26710 : 467.0) Encodes a member of the cytochrome... 0.03 Orthogroups_2024-Update
PSME_00008160-RA No alias "(at2g46950 : 274.0) member of CYP709B; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00010576-RA No alias "(at2g46950 : 280.0) member of CYP709B; ""cytochrome... 0.06 Orthogroups_2024-Update
PSME_00019840-RA No alias "(at2g46960 : 199.0) member of CYP709B; ""cytochrome... 0.04 Orthogroups_2024-Update
PSME_00024559-RA No alias (at2g26710 : 430.0) Encodes a member of the cytochrome... 0.04 Orthogroups_2024-Update
PSME_00029307-RA No alias "(at2g46950 : 296.0) member of CYP709B; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00029344-RA No alias "(at1g67110 : 350.0) member of CYP709A; ""cytochrome... 0.06 Orthogroups_2024-Update
PSME_00032195-RA No alias "(at2g46950 : 249.0) member of CYP709B; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00041258-RA No alias (at2g26710 : 573.0) Encodes a member of the cytochrome... 0.04 Orthogroups_2024-Update
PSME_00041696-RA No alias "(at2g46950 : 291.0) member of CYP709B; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00045345-RA No alias (at2g26710 : 564.0) Encodes a member of the cytochrome... 0.04 Orthogroups_2024-Update
PSME_00045982-RA No alias "(at2g46950 : 466.0) member of CYP709B; ""cytochrome... 0.03 Orthogroups_2024-Update
Potri.010G139600 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G404400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.5G235200.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.001G359300.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.003G109832.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.003G228500.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.003G229000.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.003G229200.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sopen07g025710 No alias Cytochrome P450 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 96 372
No external refs found!