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  5. PSME_00029021-RA

PSME_00029021-RA


Description : (at2g38290 : 609.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1218.0) & (original description: no original description)


Gene families : OG_42_0000450 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029021-RA
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G030800 No alias ammonium transporter 2 0.04 Orthogroups_2024-Update
MA_10433341g0010 No alias (at2g38290 : 598.0) encodes a high-affinity ammonium... 0.05 Orthogroups_2024-Update
PSME_00026874-RA No alias (at2g38290 : 513.0) encodes a high-affinity ammonium... 0.04 Orthogroups_2024-Update
PSME_00042558-RA No alias (at2g38290 : 588.0) encodes a high-affinity ammonium... 0.03 Orthogroups_2024-Update
Sobic.003G344700.1 No alias ammonium transporter *(AMT2/3) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA InterProScan predictions
BP GO:0015696 ammonium transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 24 448
No external refs found!