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  5. PSME_00029072-RA

PSME_00029072-RA


Description : (at4g19420 : 426.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 852.0) & (original description: no original description)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00029072-RA
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
271371 No alias Pectinacetylesterase family protein 0.04 Orthogroups_2024-Update
Bradi2g12047 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
Glyma.03G225400 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
Glyma.18G179800 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G053400.50 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G114530.1 No alias pectin acetylesterase *(PAE) 0.04 Orthogroups_2024-Update
LOC_Os01g74330 No alias pectinacetylesterase domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g51340 No alias pectinacetylesterase domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_3303g0010 No alias (at5g23870 : 345.0) Pectinacetylesterase family protein;... 0.04 Orthogroups_2024-Update
PSME_00006550-RA No alias (at4g19420 : 301.0) Pectinacetylesterase family protein;... 0.06 Orthogroups_2024-Update
Seita.1G287600.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Seita.5G153500.1 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
Solyc08g075050 No alias Pectinacetylesterase family protein (AHRD V3.3 *** AT4G19420.2) 0.02 Orthogroups_2024-Update
Sopen10g035860 No alias Pectinacetylesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 56 401
No external refs found!